Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548l in AC Brain Sun Cluster 7 Table contains all genes in the AC Brain Sun cluster number 7. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548l 55916 NXT2 nuclear transport factor 2-like export factor 2 [Source:HGNC Symbol;Acc:18151] zzz999 441150 C6orf226 chromosome 6 open reading frame 226 [Source:HGNC Symbol;Acc:34431] zzz999 55252 ASXL2 additional sex combs like 2 (Drosophila) [Source:HGNC Symbol;Acc:23805] T 79618 HMBOX1 homeobox containing 1 [Source:HGNC Symbol;Acc:26137] zzz999 29035 C16orf72 chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:30103] T 5883 RAD9A RAD9 homolog A (S. pombe) [Source:HGNC Symbol;Acc:9827] zzz999 9716 AQR aquarius homolog (mouse) [Source:HGNC Symbol;Acc:29513] zzz999 108 ADCY2 adenylate cyclase 2 (brain) [Source:HGNC Symbol;Acc:233] P T 79039 DDX54 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:HGNC Symbol;Acc:20084] zzz999 2108 ETFA electron-transfer-flavoprotein, alpha polypeptide [Source:HGNC Symbol;Acc:3481] zzz999 22929 SEPHS1 selenophosphate synthetase 1 [Source:HGNC Symbol;Acc:19685] P T 4289 MKLN1 muskelin 1, intracellular mediator containing kelch motifs [Source:HGNC Symbol;Acc:7109] P T 92181 UBTD2 ubiquitin domain containing 2 [Source:HGNC Symbol;Acc:24463] zzz999 134553 C5orf24 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:26746] P T 2959 GTF2B general transcription factor IIB [Source:HGNC Symbol;Acc:4648] zzz999 54542 RC3H2 ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:21461] zzz999 10402 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:18080] zzz999 10045 SH2D3A SH2 domain containing 3A [Source:HGNC Symbol;Acc:16885] zzz999 51678 MPP6 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) [Source:HGNC Symbol;Acc:18167] zzz999 57514 ARHGAP31 Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:29216] zzz999 374354 NHLRC2 NHL repeat containing 2 [Source:HGNC Symbol;Acc:24731] zzz999 340562 SATL1 spermidine/spermine N1-acetyl transferase-like 1 [Source:HGNC Symbol;Acc:27992] zzz999 51116 MRPS2 mitochondrial ribosomal protein S2 [Source:HGNC Symbol;Acc:14495] zzz999 253430 IPMK inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:20739] P T 494143 CHAC2 ChaC, cation transport regulator homolog 2 (E. coli) [Source:HGNC Symbol;Acc:32363] zzz999 56916 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:18398] T 57563 KLHL8 kelch-like 8 (Drosophila) [Source:HGNC Symbol;Acc:18644] zzz999 55573 CDV3 CDV3 homolog (mouse) [Source:HGNC Symbol;Acc:26928] zzz999 7633 ZNF79 zinc finger protein 79 [Source:HGNC Symbol;Acc:13153] zzz999 29066 ZC3H7A zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:30959] zzz999 132789 GNPDA2 glucosamine-6-phosphate deaminase 2 [Source:HGNC Symbol;Acc:21526] zzz999 57693 ZNF317 zinc finger protein 317 [Source:HGNC Symbol;Acc:13507] zzz999 4023 LPL lipoprotein lipase [Source:HGNC Symbol;Acc:6677] zzz999 10610 ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [Source:HGNC Symbol;Acc:10867] zzz999 23382 AHCYL2 adenosylhomocysteinase-like 2 [Source:HGNC Symbol;Acc:22204] T 128077 LIX1L Lix1 homolog (mouse)-like [Source:HGNC Symbol;Acc:28715] P T 9775 EIF4A3 eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:18683] zzz999 5927 KDM5A lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886] T 10713 USP39 ubiquitin specific peptidase 39 [Source:HGNC Symbol;Acc:20071] zzz999 56907 SPIRE1 spire homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:30622] zzz999 10768 AHCYL1 adenosylhomocysteinase-like 1 [Source:HGNC Symbol;Acc:344] zzz999 202151 RANBP3L RAN binding protein 3-like [Source:HGNC Symbol;Acc:26353] zzz999 150379 PNPLA5 patatin-like phospholipase domain containing 5 [Source:HGNC Symbol;Acc:24888] zzz999 51260 CXorf26 chromosome X open reading frame 26 [Source:HGNC Symbol;Acc:28790] zzz999 79142 PHF23 PHD finger protein 23 [Source:HGNC Symbol;Acc:28428] zzz999 4841 NONO non-POU domain containing, octamer-binding [Source:HGNC Symbol;Acc:7871] zzz999 138199 C9orf41 chromosome 9 open reading frame 41 [Source:HGNC Symbol;Acc:23435] P T 10257 ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 [Source:HGNC Symbol;Acc:55] T 4947 OAZ2 ornithine decarboxylase antizyme 2 [Source:HGNC Symbol;Acc:8096] zzz999 51496 CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:HGNC Symbol;Acc:26936] T 55105 GPATCH2 G patch domain containing 2 [Source:HGNC Symbol;Acc:25499] T 28987 NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29540] zzz999 57494 RIMKLB ribosomal modification protein rimK-like family member B [Source:HGNC Symbol;Acc:29228] P T 54756 IL17RD interleukin 17 receptor D [Source:HGNC Symbol;Acc:17616] T 1767 DNAH5 dynein, axonemal, heavy chain 5 [Source:HGNC Symbol;Acc:2950] zzz999 84239 ATP13A4 ATPase type 13A4 [Source:HGNC Symbol;Acc:25422] T 116092 DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 [Source:HGNC Symbol;Acc:16160] zzz999 219899 TBCEL tubulin folding cofactor E-like [Source:HGNC Symbol;Acc:28115] zzz999 83548 COG3 component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:18619] P T 26092 TOR1AIP1 torsin A interacting protein 1 [Source:HGNC Symbol;Acc:29456] zzz999 59345 GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 [Source:HGNC Symbol;Acc:20731] T 340385 ZNF517 zinc finger protein 517 [Source:HGNC Symbol;Acc:27984] zzz999 23118 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 [Source:HGNC Symbol;Acc:17075] zzz999 29115 SAP30BP SAP30 binding protein [Source:HGNC Symbol;Acc:30785] zzz999 8358 HIST1H3J histone cluster 1, H3j [Source:HGNC Symbol;Acc:4774] zzz999 27252 KLHL20 kelch-like 20 (Drosophila) [Source:HGNC Symbol;Acc:25056] zzz999 867 CBL Cas-Br-M (murine) ecotropic retroviral transforming sequence [Source:HGNC Symbol;Acc:1541] zzz999 64093 SMOC1 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:20318] zzz999 80321 CEP70 centrosomal protein 70kDa [Source:HGNC Symbol;Acc:29972] zzz999 55028 C17orf80 chromosome 17 open reading frame 80 [Source:HGNC Symbol;Acc:29601] T 10105 PPIF peptidylprolyl isomerase F [Source:HGNC Symbol;Acc:9259] zzz999 55937 APOM apolipoprotein M [Source:HGNC Symbol;Acc:13916] zzz999 1499 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa [Source:HGNC Symbol;Acc:2514] P T 4664 NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) [Source:HGNC Symbol;Acc:7626] T 196527 ANO6 anoctamin 6 [Source:HGNC Symbol;Acc:25240] zzz999 253635 CCDC75 coiled-coil domain containing 75 [Source:HGNC Symbol;Acc:26768] T 11036 GTF2A1L general transcription factor IIA, 1-like [Source:HGNC Symbol;Acc:30727] zzz999 25939 SAMHD1 SAM domain and HD domain 1 [Source:HGNC Symbol;Acc:15925] zzz999 2033 EP300 E1A binding protein p300 [Source:HGNC Symbol;Acc:3373] T 91452 ACBD5 acyl-CoA binding domain containing 5 [Source:HGNC Symbol;Acc:23338] zzz999 137209 ZNF572 zinc finger protein 572 [Source:HGNC Symbol;Acc:26758] T 7158 TP53BP1 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:11999] zzz999 79666 PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:HGNC Symbol;Acc:20757] T 9329 GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa [Source:HGNC Symbol;Acc:4667] zzz999 53981 CPSF2 cleavage and polyadenylation specific factor 2, 100kDa [Source:HGNC Symbol;Acc:2325] T 51002 TPRKB TP53RK binding protein [Source:HGNC Symbol;Acc:24259] zzz999 7079 TIMP4 TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:11823] zzz999 9980 DOPEY2 dopey family member 2 [Source:HGNC Symbol;Acc:1291] T 54529 ASNSD1 asparagine synthetase domain containing 1 [Source:HGNC Symbol;Acc:24910] zzz999 163859 C1orf55 chromosome 1 open reading frame 55 [Source:HGNC Symbol;Acc:26643] T 343450 KCNT2 potassium channel, subfamily T, member 2 [Source:HGNC Symbol;Acc:18866] T 84294 UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:28224] T 285195 SLC9A9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 [Source:HGNC Symbol;Acc:20653] zzz999 8450 CUL4B cullin 4B [Source:HGNC Symbol;Acc:2555] T 5286 PIK3C2A phosphoinositide-3-kinase, class 2, alpha polypeptide [Source:HGNC Symbol;Acc:8971] P T 5827 PXMP2 peroxisomal membrane protein 2, 22kDa [Source:HGNC Symbol;Acc:9716] zzz999 57570 TRMT5 TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23141] zzz999 93081 C13orf27 chromosome 13 open reading frame 27 [Source:HGNC Symbol;Acc:25188] zzz999 4236 MFAP1 microfibrillar-associated protein 1 [Source:HGNC Symbol;Acc:7032] T 1656 DDX6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:HGNC Symbol;Acc:2747] T 84273 C4orf14 chromosome 4 open reading frame 14 [Source:HGNC Symbol;Acc:28473] zzz999 203547 VMA21 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:22082] T 10890 RAB10 RAB10, member RAS oncogene family [Source:HGNC Symbol;Acc:9759] P T 154743 C7orf60 chromosome 7 open reading frame 60 [Source:HGNC Symbol;Acc:26475] T 60560 NAA35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:HGNC Symbol;Acc:24340] T 22893 BAHD1 bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:29153] zzz999 55602 CDKN2AIP CDKN2A interacting protein [Source:HGNC Symbol;Acc:24325] zzz999 84450 ZNF512 zinc finger protein 512 [Source:HGNC Symbol;Acc:29380] zzz999 8439 NSMAF neutral sphingomyelinase (N-SMase) activation associated factor [Source:HGNC Symbol;Acc:8017] zzz999 84465 MEGF11 multiple EGF-like-domains 11 [Source:HGNC Symbol;Acc:29635] P T 23063 WAPAL wings apart-like homolog (Drosophila) [Source:HGNC Symbol;Acc:23293] P T 155054 ZNF425 zinc finger protein 425 [Source:HGNC Symbol;Acc:20690] zzz999 7812 CSDE1 cold shock domain containing E1, RNA-binding [Source:HGNC Symbol;Acc:29905] zzz999 57396 CLK4 CDC-like kinase 4 [Source:HGNC Symbol;Acc:13659] T 79726 WDR59 WD repeat domain 59 [Source:HGNC Symbol;Acc:25706] zzz999 9321 TRIP11 thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:12305] T 55218 EXD2 exonuclease 3'-5' domain containing 2 [Source:HGNC Symbol;Acc:20217] zzz999 121274 ZNF641 zinc finger protein 641 [Source:HGNC Symbol;Acc:31834] zzz999 11222 MRPL3 mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:10379] zzz999 84272 YIPF4 Yip1 domain family, member 4 [Source:HGNC Symbol;Acc:28145] P T 51290 ERGIC2 ERGIC and golgi 2 [Source:HGNC Symbol;Acc:30208] zzz999 57551 TAOK1 TAO kinase 1 [Source:HGNC Symbol;Acc:29259] T 8573 CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) [Source:HGNC Symbol;Acc:1497] zzz999 55435 AP1AR adaptor-related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:28808] P T 90488 C12orf23 chromosome 12 open reading frame 23 [Source:HGNC Symbol;Acc:28281] zzz999 57604 zzz999 Putative methyltransferase KIAA1456 [Source:UniProtKB/Swiss-Prot;Acc:Q9P272] T 123228 SENP8 SUMO/sentrin specific peptidase family member 8 [Source:HGNC Symbol;Acc:22992] zzz999 1615 DARS aspartyl-tRNA synthetase [Source:HGNC Symbol;Acc:2678] T 5925 RB1 retinoblastoma 1 [Source:HGNC Symbol;Acc:9884] zzz999 5062 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 [Source:HGNC Symbol;Acc:8591] T 55629 PNRC2 proline-rich nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:23158] zzz999 11196 SEC23IP SEC23 interacting protein [Source:HGNC Symbol;Acc:17018] zzz999 9497 SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:HGNC Symbol;Acc:11033] P T 8943 AP3D1 adaptor-related protein complex 3, delta 1 subunit [Source:HGNC Symbol;Acc:568] zzz999

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